Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885121.1_cds_XP_016439074.1_34666
CDS Infomation

[gene=LOC107765019] [db_xref=GeneID:107765019] [protein=chromo domain protein LHP1-like] [protein_id=XP_016439074.1] [location=join(33761..34126,34263..34288,34552..34638,34757..35476,37545..37605,38089..38136)] [gbkey=CDS]
Sequence

ATGAAAGGAGGGAAGAAGAAAAACTCCAGCATTCCGGCAGGTACAGACTCCCTAAAGCCC
CCGTCGGAATCCGGAAACGGTAACCGTGAGTTGCCGTGGGACGGTATGTTGGAACCTCAA
GGAGAAGAAGCTCAGCAGCAGCAGCAAGAGAGAGATGAAACTCCAGAAGACGCCGCCGGC
GACGGCGATGAGGAACCTGTGGCGTCGCCGGAGGCTGGAGAAGAAGAAGAAAATGAAGAA
AAAACTTATGAAGAGGAGTTTGAAATGGAAGGAGATGGGGATGATGGTGAAGCTGATAAT
GAAAAACCAAAACTTGCTGAAGGGTTTTATGAAATTGAAGCCGTTAGGAGAAAAAGAATA
CGAAAGGGTCAAGTTCAGTATTTGATTAAATGGCGAGGCTGGCCAGAGACGGCAAATACA
TGGGAACCTGTGAAGAATCTAATGTCCTGTTCTGATGTTATTGAATCATTTGAAGAGAGC
TTGCAGTCAGGGAAACAACGATCCACACGCAAGCGTAAGCGAAAATGTGGGGTTACACAC
ACTCAGCCCAAGAAAAAGCAGCAGCAGCAGTGTTCCCCTCCAGATGCTACATATAATGTG
CCAGCAGTGAAGGTTAGGATAATTGAGGAACCTACACCCTCATCTCCTCTGAATGGTTTG
AAGGCTATGAGTCGTGTGGACAGTAATGGTAGTGAATTGAGCAGCAAAGTAGACAAAGTG
GTGAATGGCAATGGTTTGGAGTTAGGTTTCTCTCTAGAGGAAACTAGAGAGCAAAATGAG
TTGAATTTGAAGTTGAGTGAATTAAAAGGAGCAATGTCGACCAATGAAAACTCTGTGGAT
AGATCTGCTAATGGTCTCTCAAATGGATTTGCAAAGGTCAATGGTGCAGAGTCCTTTCAA
TCTGATCGCTGCACTGGAGCTAGAAAGAGGAAATCTGGTTCTGTTCGGAGGTTTAAACAG
GATACTACCACAGCTGTGATGGATGGTATCCAAGATGCTGCATTAGGTGGTCCGTTGGCT
ACTTTTGTGCAGGAAGGAAGTCACAATCATGAATTTGTGGGTAGTGACTTTGTTTTTAAA
AACAAGTCTGATGATTCCAAAGATGCATATACAATTACACATATAGTCAAGCCTATGAGC
TATTCAACATATTTATCCAATGATATGCAGGACGTCTCAATAACCTTTCTTGCCAAGAGG
TCTGACGGAAAGGAAGTGATGGTGGATAACAAGTTTCTGAAGTTGAATAATCCACTTTTG
TTGATAAACTACTATGAGCAGCATTTGCGATATCATCCCCCTCAATGA

Peptide Sequence

PEP ID

XP_016439074.1
PEP Infomation

PREDICTED: chromo domain protein LHP1-like [Nicotiana tabacum]
Sequence

MKGGKKKNSSIPAGTDSLKPPSESGNGNRELPWDGMLEPQGEEAQQQQQERDETPEDAAG
DGDEEPVASPEAGEEEENEEKTYEEEFEMEGDGDDGEADNEKPKLAEGFYEIEAVRRKRI
RKGQVQYLIKWRGWPETANTWEPVKNLMSCSDVIESFEESLQSGKQRSTRKRKRKCGVTH
TQPKKKQQQQCSPPDATYNVPAVKVRIIEEPTPSSPLNGLKAMSRVDSNGSELSSKVDKV
VNGNGLELGFSLEETREQNELNLKLSELKGAMSTNENSVDRSANGLSNGFAKVNGAESFQ
SDRCTGARKRKSGSVRRFKQDTTTAVMDGIQDAALGGPLATFVQEGSHNHEFVGSDFVFK
NKSDDSKDAYTITHIVKPMSYSTYLSNDMQDVSITFLAKRSDGKEVMVDNKFLKLNNPLL
LINYYEQHLRYHPPQ

Transcript Sequence

Gene sequence data has not been registered.